STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2077Putative galactose mutarotase; Similar to related. (358 aa)    
Predicted Functional Partners:
glk
Glucokinase; Belongs to the bacterial glucokinase family.
 
  
 0.923
PHZ_c2076
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.818
pdhB
Pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
  
 0.526
manC
Mannose-1-phosphate guanylyltransferase.
  
  
 0.507
PHZ_c3418
NADP-dependent malic enzyme.
     
 0.458
PHZ_c3042
Conserved hypothetical protein.
  
     0.455
pssP
Exopolysaccharide polymerization protein.
      
 0.418
PHZ_c2476
Mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.416
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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