STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2086Conserved hypothetical protein. (369 aa)    
Predicted Functional Partners:
PHZ_c2087
Glycosyltransferase.
    0.960
PHZ_c2088
Nucleoside-diphosphate-sugar epimerase.
 
    0.951
PHZ_c2089
Nucleoside-diphosphate-sugar epimerase.
 
    0.949
PHZ_c2085
Conserved hypothetical protein.
 
    
0.855
PHZ_c2084
Conserved hypothetical protein.
 
    
0.851
PHZ_c2091
Methyltransferase type 11.
 
     0.798
PHZ_c2092
Conserved hypothetical protein.
 
     0.798
PHZ_c2665
Threonine dehydrogenase; Similar to related.
 
     0.784
gfo
Glucose-fructose oxidoreductase.
 
     0.779
PHZ_c2484
NAD-dependent epimerase/dehydratase.
 
    0.777
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.