STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2429Conserved hypothetical protein. (784 aa)    
Predicted Functional Partners:
PHZ_c2428
Hypothetical protein.
 
  
 0.959
PHZ_c2430
Conserved hypothetical protein.
 
   
 0.953
PHZ_c2431
DNA (cytosine-5-)-methyltransferase protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
  
 0.809
PHZ_c2339
Phospholipase D/transphosphatidylase.
   
 0.771
PHZ_c2698
dnaJ-class molecular chaperone.
   
 0.740
PHZ_c2570
Phospholipid-binding protein.
   
 0.738
PHZ_c2093
Dual specificity protein phosphatase.
   
 0.688
atpE
AtpE, ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.687
PHZ_c0148
Conserved hypothetical protein.
     
 0.672
groEL
Heat shock protein chaperonin, HSP60; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 0.655
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.