STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2509Glucosyltransferase protein. (311 aa)    
Predicted Functional Partners:
pssP
Exopolysaccharide polymerization protein.
 
  
 0.627
PHZ_c1147
Lipid A core - O-antigen ligase-like protein.
 
  
 0.597
PHZ_c1146
Polysaccharide transporter, PST family.
 
  
 0.594
PHZ_c1144
Succinoglycan biosynthesis protein.
 
  
 0.566
PHZ_c1150
Glycosyl transferase, group 2 family protein.
 
  
 0.518
PHZ_c2166
Periplasmic protein involved in polysaccharide export.
 
  
 0.468
rfbP
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.462
PHZ_c2510
4-coumarate-CoA ligase.
   
   0.452
PHZ_c1136
Sugar transferase.
 
  
 0.426
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.