STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c25435,10-methylenetetrahydromethanopterin reductase. (345 aa)    
Predicted Functional Partners:
PHZ_c2538
LPPG:Fo 2-phospho-L-lactate transferase.
 
   
 0.932
fbiD
Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
   
 0.930
PHZ_c2536
Conserved hypothetical protein.
 
  
 0.915
PHZ_c2539
Conserved hypothetical protein.
 
  
 0.889
PHZ_c2547
Conserved hypothetical protein.
 
   
 0.795
PHZ_c2542
acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
       0.773
PHZ_c2541
acyl-CoA dehydrogenase.
 
    0.754
PHZ_c2540
acyl-CoA dehydrogenase.
 
    0.728
PHZ_c2535
enoyl-CoA hydratase/carnithine racemase.
       0.588
PHZ_c0399
Transcriptional regulator,putative TetR family.
  
   
 0.576
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.