STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2560propionyl-CoA carboxylase. (519 aa)    
Predicted Functional Partners:
bccA
acetyl/propionyl-CoA carboxylase, alpha subunit.
 
 0.988
pccA
propionyl-CoA carboxylase, alpha subunit.
 
 0.987
accC
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.914
PHZ_c2559
Biotin protein.
 
  
 0.810
PHZ_c1787
Lactoylglutathione lyase.
 
 
 0.777
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.684
PHZ_c1790
Biotin protein ligase.
 
 
 0.671
mutB
methylmalonyl-CoA mutase, alpha subunit.
 
   
 0.618
PHZ_c2558
acyl-CoA dehydrogenase.
  
  
 0.602
mvaB
3-hydroxy-3-methylglutarate-CoA lyase.
 
 0.587
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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