Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PHZ_c2694 | PHZ_c2695 | PHZ_c2694 | PHZ_c2695 | Conserved hypothetical protein. | Sensor histidine kinase. | 0.538 |
| PHZ_c2694 | cycH | PHZ_c2694 | PHZ_c2693 | Conserved hypothetical protein. | Cytochrome c-type biogenesis protein CycH. | 0.608 |
| PHZ_c2694 | cycJ | PHZ_c2694 | PHZ_c2692 | Conserved hypothetical protein. | Cytochrome c-type biogenesis protein CycJ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.608 |
| PHZ_c2694 | cycK | PHZ_c2694 | PHZ_c2691 | Conserved hypothetical protein. | Cytochrome c-type biogenesis protein CycK. | 0.608 |
| PHZ_c2694 | cycL | PHZ_c2694 | PHZ_c2690 | Conserved hypothetical protein. | Cytochrome c-type biogenesis protein CycL; Possible subunit of a heme lyase. | 0.605 |
| PHZ_c2695 | PHZ_c2694 | PHZ_c2695 | PHZ_c2694 | Sensor histidine kinase. | Conserved hypothetical protein. | 0.538 |
| PHZ_c2695 | cycH | PHZ_c2695 | PHZ_c2693 | Sensor histidine kinase. | Cytochrome c-type biogenesis protein CycH. | 0.451 |
| PHZ_c2695 | cycJ | PHZ_c2695 | PHZ_c2692 | Sensor histidine kinase. | Cytochrome c-type biogenesis protein CycJ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.515 |
| PHZ_c2695 | cycK | PHZ_c2695 | PHZ_c2691 | Sensor histidine kinase. | Cytochrome c-type biogenesis protein CycK. | 0.519 |
| PHZ_c2695 | cycL | PHZ_c2695 | PHZ_c2690 | Sensor histidine kinase. | Cytochrome c-type biogenesis protein CycL; Possible subunit of a heme lyase. | 0.451 |
| ccmA | ccmB | PHZ_c0140 | PHZ_c0139 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.999 |
| ccmA | ccmC | PHZ_c0140 | PHZ_c0136 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme ABC transporter, permease protein (involved in cytochrome-c biogenesis); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.998 |
| ccmA | ccoP | PHZ_c0140 | PHZ_c2811 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c oxidase, CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.426 |
| ccmA | cycH | PHZ_c0140 | PHZ_c2693 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein CycH. | 0.401 |
| ccmA | cycJ | PHZ_c0140 | PHZ_c2692 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein CycJ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.795 |
| ccmA | cycK | PHZ_c0140 | PHZ_c2691 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein CycK. | 0.627 |
| ccmA | cycL | PHZ_c0140 | PHZ_c2690 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein CycL; Possible subunit of a heme lyase. | 0.658 |
| ccmA | cycY | PHZ_c0140 | PHZ_c0135 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Thiol:disulfide interchange protein CycY. | 0.466 |
| ccmB | ccmA | PHZ_c0139 | PHZ_c0140 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.999 |
| ccmB | ccmC | PHZ_c0139 | PHZ_c0136 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Heme ABC transporter, permease protein (involved in cytochrome-c biogenesis); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.999 |
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