STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2702ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (330 aa)    
Predicted Functional Partners:
PHZ_c2704
ABC transporter, permease protein.
 
  
 0.985
PHZ_c2703
ABC transporter, ATP-binding protein.
 
  
 0.980
cysN
Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase cysN/C; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.600
PHZ_c1133
Luciferase-like protein.
 
  
 0.562
ysG
Siroheme synthase.
  
  
 0.536
PHZ_c0971
Nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
  
 0.528
gltB
Glutamate synthase, large subunit.
   
  
 0.449
PHZ_c2543
5,10-methylenetetrahydromethanopterin reductase.
  
  
 0.415
PHZ_c2545
5,10-methylenetetrahydromethanopterin reductase.
  
  
 0.415
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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