STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2754Conserved hypothetical protein. (139 aa)    
Predicted Functional Partners:
PHZ_c2753
Transcriptional regulator, ArsR family.
 
  
 0.905
PHZ_c2631
Conserved hypothetical protein.
  
     0.653
PHZ_c1971
Transcriptional regulator, ArsR family.
 
  
 0.650
tyrA
Cyclohexadienyl dehydrogenase.
       0.550
PHZ_c1970
Conserved hypothetical protein.
  
     0.547
PHZ_c1258
Transcriptional regulator, ArsR family.
 
     0.533
PHZ_c2632
Transcriptional regulator, ArsR family.
 
  
 0.488
PHZ_c2203
Conserved hypothetical protein.
  
     0.450
PHZ_c2782
Conserved hypothetical protein.
 
     0.436
PHZ_c2783
Conserved hypothetical protein.
 
     0.411
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.