STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2955Pentapeptide repeat family protein. (421 aa)    
Predicted Functional Partners:
PHZ_c2954
Pentapeptide repeat family protein.
 
    
0.784
PHZ_c2254
Conserved hypothetical protein.
 
     0.658
PHZ_c3334
Conserved hypothetical protein.
  
     0.653
ribD
Riboflavin biosynthesis protein RibD.
       0.631
PHZ_c1297
Conserved hypothetical protein.
  
     0.614
gpm
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
       0.579
PHZ_c1618
Response regulator.
  
     0.566
PHZ_c0187
Conserved hypothetical protein.
  
     0.554
PHZ_c1388
Regulatory protein FlaEY.
 
     0.544
PHZ_c1771
Conserved hypothetical protein.
  
     0.535
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.