STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c3323Reductase (probable nitrate reductase / sulfite dehydrogenase). (254 aa)    
Predicted Functional Partners:
PHZ_c3324
Conserved hypothetical protein.
    0.995
PHZ_c3308
Conserved hypothetical protein.
   
 
 0.838
PHZ_c3321
Glyoxalase/bleomycin resistance protein/dioxygenase.
     
 0.776
PHZ_c3322
Conserved hypothetical protein.
       0.773
ccoP
Cytochrome c oxidase, CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 
 0.692
PHZ_c0286
Cytochrome c family protein.
  
 
 0.544
PHZ_c0360
Cytochrome c, membrane-bound.
  
 
 0.544
PHZ_c1122
Cytochrome c family protein.
  
 
 0.544
PHZ_c1188
Cytochrome c family protein.
  
 
 0.544
PHZ_c0278
Molybdopterin converting factor, subunit 2.
 
   
 0.543
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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