STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmaCarbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (912 aa)    
Predicted Functional Partners:
ARG96354.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
ARG98122.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.
   
    0.645
ARG98607.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.522
ARG97358.1
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.483
ARG98277.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.458
ARG98208.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.429
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.415
ppnK
NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.415
sul
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.406
Your Current Organism:
Tatlockia micdadei
NCBI taxonomy Id: 451
Other names: ATCC 33218, CCUG 11882, CIP 103882, DSM 16640, Legionella micdadei, Legionella pittsburghensis, NCTC 11371, T. micdadei, strain TATLOCK
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.