STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG96977.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)    
Predicted Functional Partners:
ARG96976.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.933
ARG98840.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.898
yrbF
ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.821
B6N58_02515
ABC transporter ATP-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.724
yrbE
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.724
ARG97842.1
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.716
motB
Flagellar motor protein MotD; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.637
ARG98681.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
B6N58_01295
Efflux transporter periplasmic adaptor subunit; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.475
motB-2
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.466
Your Current Organism:
Tatlockia micdadei
NCBI taxonomy Id: 451
Other names: ATCC 33218, CCUG 11882, CIP 103882, DSM 16640, Legionella micdadei, Legionella pittsburghensis, NCTC 11371, T. micdadei, strain TATLOCK
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.