Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARG97596.1L,D-transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)    
Predicted Functional Partners:
AnkH
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
dotL
Phosphoesterase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
icmE
Type IV secretion protein IcmK; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
ARG96474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.673
ARG98724.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.651
ARG98692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
ARG97199.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.625
ARG98380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.616
fliS
Flagellar export chaperone FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.615
ARG97587.1
Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.612
Your Current Organism:
Tatlockia micdadei
NCBI taxonomy Id: 451
Other names: ATCC 33218, CCUG 11882, CIP 103882, DSM 16640, Legionella micdadei, Legionella pittsburghensis, NCTC 11371, T. micdadei, strain TATLOCK
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.