STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG97705.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (4370 aa)    
Predicted Functional Partners:
ARG97454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.848
ARG98901.1
SCP-like extracellular; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.838
ARG97706.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ARG98688.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.731
osmY
Ornithine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.723
icmE
Type IV secretion protein IcmK; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.668
ARG98932.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
ARG97547.1
Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
  
     0.639
ARG97065.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.599
icmF
Type VI secretion protein IcmF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.566
Your Current Organism:
Tatlockia micdadei
NCBI taxonomy Id: 451
Other names: ATCC 33218, CCUG 11882, CIP 103882, DSM 16640, Legionella micdadei, Legionella pittsburghensis, NCTC 11371, T. micdadei, strain TATLOCK
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.