STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdcC-2Biotin-independent malonate decarboxylase subunit beta; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism. (403 aa)    
Predicted Functional Partners:
mdcB
triphosphoribosyl-dephospho-CoA synthase MdcB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.994
mdcC
Biotin-independent malonate decarboxylase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.992
ARG97771.1
Malonate decarboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.983
ARG98129.1
triphosphoribosyl-dephospho-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
citE
CoA ester lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.970
ARG97766.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.902
glpD
Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
   
    0.888
ARG97768.1
Malonate decarboxylase holo-[acyl-carrier-protein] synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
fabD
Malonyl CoA-acyl carrier protein transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.528
etfdh
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
       0.496
Your Current Organism:
Tatlockia micdadei
NCBI taxonomy Id: 451
Other names: ATCC 33218, CCUG 11882, CIP 103882, DSM 16640, Legionella micdadei, Legionella pittsburghensis, NCTC 11371, T. micdadei, strain TATLOCK
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.