STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N5AFY0Uncharacterized protein. (384 aa)    
Predicted Functional Partners:
A0A0N5AVP8
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.999
A0A0N5AT84
TRASH domain-containing protein.
   
 
 0.998
A0A0N5ATZ1
Uncharacterized protein.
   
 
 0.998
A0A0N5A7S5
Uncharacterized protein.
   
 
 0.997
A0A0N5AF18
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.997
A0A0N5AH51
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.997
A0A0N5AHZ2
CP-type G domain-containing protein.
   
 
 0.996
A0A0N5AVS5
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.996
A0A0N5ADQ5
RRM domain-containing protein.
   
 
 0.995
A0A0N5AAA1
RNA helicase.
   
 
 0.994
Your Current Organism:
Syphacia muris
NCBI taxonomy Id: 451379
Other names: S. muris
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