STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N5AGQ6Uncharacterized protein. (579 aa)    
Predicted Functional Partners:
A0A0N5ADU7
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
  
 
 0.959
A0A0N5ACN6
Helicase ATP-binding domain-containing protein.
   
 0.906
A0A0N5AE95
Uncharacterized protein.
   
 0.867
A0A0N5AGN3
Rad51 domain-containing protein.
  
 
 0.867
A0A0N5ASK4
ERCC4 domain-containing protein.
   
 0.836
A0A0N5AI74
Uncharacterized protein.
  
  
 
0.821
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.809
A0A158R3X6
Uncharacterized protein; Belongs to the RecA family.
  
 
 0.799
A0A0N5AHT9
RuvB-like helicase; Belongs to the RuvB family.
    
 0.781
A0A0N5AH58
Uncharacterized protein.
   
 0.768
Your Current Organism:
Syphacia muris
NCBI taxonomy Id: 451379
Other names: S. muris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.