STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N5AI58Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (388 aa)    
Predicted Functional Partners:
A0A0N5ADJ5
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.994
A0A0N5ARQ4
WD_REPEATS_REGION domain-containing protein.
    
 
 0.961
A0A0N5AL29
Uncharacterized protein.
  
 
 0.957
A0A0N5A9U3
Tr-type G domain-containing protein.
   
 
 0.947
A0A0N5B027
GTP_EFTU_D3 domain-containing protein.
   
 
 0.947
A0A0N5AUU9
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 
 0.945
A0A0N5AE15
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.938
A0A0N5ATM9
Ribosomal_S10 domain-containing protein.
    
 
 0.937
A0A0N5AUT1
Uncharacterized protein.
   
 
 0.937
A0A0N5AD25
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 
 0.936
Your Current Organism:
Syphacia muris
NCBI taxonomy Id: 451379
Other names: S. muris
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