Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N5API4Uncharacterized protein. (326 aa)    
Predicted Functional Partners:
A0A158R3Y7
Uncharacterized protein.
    
 0.974
A0A0N5AT24
LID domain-containing protein.
    
 0.964
A0A0N5ABV6
Uncharacterized protein.
    
 
 0.923
A0A0N5ARZ9
Homeobox domain-containing protein.
    
 0.867
A0A0N5AN92
POU domain protein.
   
 
 0.793
A0A158R545
Homeobox domain-containing protein.
   
  
 0.790
A0A0N5AL21
Uncharacterized protein.
    
 0.754
A0A0N5AYP0
Homeobox domain-containing protein.
      
 0.734
A0A158R556
IPT/TIG domain-containing protein.
      
 0.728
A0A0N5AZF2
Homeobox domain-containing protein.
      
 0.716
Your Current Organism:
Syphacia muris
NCBI taxonomy Id: 451379
Other names: S. muris
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