A0A0N5AXW0 protein (Syphacia muris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0N5AXW0

RING-type domain-containing protein. (221 aa)

Predicted Functional Partners:

A0A0N5AI38

0.976

A0A0N5AWS5

0.914

A0A0N5AAD7

0.909

A0A0N5AZZ8

0.909

A0A0N5AM49

0.907

A0A0N5ALT3

0.887

A0A0N5AV69

0.876

A0A0N5AKW0

0.875

A0A0N5ATG7

0.862

A0A0N5AQL5

0.855

Your Current Organism:

Syphacia muris

NCBI taxonomy Id: 451379
Other names: S. muris

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0N5AAD7	A0A0N5AKW0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	JmjC domain-containing protein.	0.977
A0A0N5AAD7	A0A0N5ALT3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.905
A0A0N5AAD7	A0A0N5AQL5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.410
A0A0N5AAD7	A0A0N5AV69	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.966
A0A0N5AAD7	A0A0N5AWS5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.710
A0A0N5AAD7	A0A0N5AXW0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RING-type domain-containing protein.	0.909
A0A0N5AI38	A0A0N5AV69	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.960
A0A0N5AI38	A0A0N5AWS5	Uncharacterized protein; Belongs to the peptidase C14A family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.713
A0A0N5AI38	A0A0N5AXW0	Uncharacterized protein; Belongs to the peptidase C14A family.	RING-type domain-containing protein.	0.976
A0A0N5AKW0	A0A0N5AAD7	JmjC domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.977
A0A0N5AKW0	A0A0N5ALT3	JmjC domain-containing protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.430
A0A0N5AKW0	A0A0N5AV69	JmjC domain-containing protein.	Uncharacterized protein.	0.875
A0A0N5AKW0	A0A0N5AWS5	JmjC domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.780
A0A0N5AKW0	A0A0N5AXW0	JmjC domain-containing protein.	RING-type domain-containing protein.	0.875
A0A0N5AKW0	A0A0N5AZZ8	JmjC domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.977
A0A0N5ALT3	A0A0N5AAD7	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.905
A0A0N5ALT3	A0A0N5AKW0	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	JmjC domain-containing protein.	0.430
A0A0N5ALT3	A0A0N5AV69	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.996
A0A0N5ALT3	A0A0N5AWS5	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.522
A0A0N5ALT3	A0A0N5AXW0	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	RING-type domain-containing protein.	0.887