STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A158R621Uncharacterized protein. (726 aa)    
Predicted Functional Partners:
A0A0N5A8R7
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
    
  0.584
A0A0N5ABF0
ThiF domain-containing protein.
    
  0.584
A0A0N5ADJ5
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.579
A0A0N5ABA2
Ubiquitin-like domain-containing protein.
    
  0.537
A0A0N5AGK7
Ubiquitin-like domain-containing protein.
    
  0.537
A0A0N5AGP1
Ubiquitin-like domain-containing protein.
    
  0.536
A0A0N5B0P5
Uncharacterized protein.
    
  0.528
A0A0N5ALB1
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
      
 0.524
A0A0N5AXM7
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.496
A0A158R3T7
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
    
  0.488
Your Current Organism:
Syphacia muris
NCBI taxonomy Id: 451379
Other names: S. muris
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