Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lspi_0330 | Lspi_0354 | Lspi_0330 | Lspi_0354 | Translation initiation protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | O-sialoglycoprotein endopeptidase. | 0.605 |
| Lspi_0330 | Lspi_1186 | Lspi_0330 | Lspi_1186 | Translation initiation protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | ATPase or kinase. | 0.604 |
| Lspi_0330 | gcp | Lspi_0330 | Lspi_0345 | Translation initiation protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.621 |
| Lspi_0347 | dnaG | Lspi_0347 | Lspi_0348 | Yqey-like protein. | DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.796 |
| Lspi_0347 | gcp | Lspi_0347 | Lspi_0345 | Yqey-like protein. | DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.585 |
| Lspi_0347 | rpsU | Lspi_0347 | Lspi_0346 | Yqey-like protein. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.981 |
| Lspi_0354 | Lspi_0330 | Lspi_0354 | Lspi_0330 | O-sialoglycoprotein endopeptidase. | Translation initiation protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.605 |
| Lspi_0354 | Lspi_1186 | Lspi_0354 | Lspi_1186 | O-sialoglycoprotein endopeptidase. | ATPase or kinase. | 0.986 |
| Lspi_0354 | Lspi_1515 | Lspi_0354 | Lspi_1515 | O-sialoglycoprotein endopeptidase. | Translation factor; Belongs to the SUA5 family. | 0.605 |
| Lspi_0354 | gcp | Lspi_0354 | Lspi_0345 | O-sialoglycoprotein endopeptidase. | DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.989 |
| Lspi_1186 | Lspi_0330 | Lspi_1186 | Lspi_0330 | ATPase or kinase. | Translation initiation protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.604 |
| Lspi_1186 | Lspi_0354 | Lspi_1186 | Lspi_0354 | ATPase or kinase. | O-sialoglycoprotein endopeptidase. | 0.986 |
| Lspi_1186 | Lspi_1515 | Lspi_1186 | Lspi_1515 | ATPase or kinase. | Translation factor; Belongs to the SUA5 family. | 0.604 |
| Lspi_1186 | dnaG | Lspi_1186 | Lspi_0348 | ATPase or kinase. | DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.411 |
| Lspi_1186 | gcp | Lspi_1186 | Lspi_0345 | ATPase or kinase. | DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.949 |
| Lspi_1515 | Lspi_0354 | Lspi_1515 | Lspi_0354 | Translation factor; Belongs to the SUA5 family. | O-sialoglycoprotein endopeptidase. | 0.605 |
| Lspi_1515 | Lspi_1186 | Lspi_1515 | Lspi_1186 | Translation factor; Belongs to the SUA5 family. | ATPase or kinase. | 0.604 |
| Lspi_1515 | gcp | Lspi_1515 | Lspi_0345 | Translation factor; Belongs to the SUA5 family. | DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.621 |
| dnaG | Lspi_0347 | Lspi_0348 | Lspi_0347 | DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Yqey-like protein. | 0.796 |
| dnaG | Lspi_1186 | Lspi_0348 | Lspi_1186 | DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | ATPase or kinase. | 0.411 |
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