Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lspi_1950O-methyltransferase. (326 aa)    
Predicted Functional Partners:
ddpA
Putative D,D-dipeptide-binding periplasmic protein DdpA precursor.
       0.746
Lspi_1952
Tetratricopeptide repeat protein.
       0.746
Lspi_1953
Two component response regulator.
       0.702
Lspi_1954
Hypothetical protein.
       0.674
Lspi_1955
Hypothetical protein.
       0.674
pksJ_2
Polyketide synthase, type I.
  
 
 
 0.549
pksJ_1
Polyketide synthase, type I.
  
     0.445
Lspi_1964
FAD dependent oxidoreductase.
 
     0.427
Lspi_2744
Putative N-hydroxyarylamine O-acetyltransferase.
  
     0.426
Lspi_1942
Non-ribosomal peptide synthase.
 
   
 0.423
Your Current Organism:
Legionella spiritensis
NCBI taxonomy Id: 452
Other names: ATCC 35249, CCUG 29715, CCUG 31118, CIP 103850, DSM 19324, JCM 7562, L. spiritensis, NCTC 11990, strain Mount Saint Helens 9
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.