STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lspi_2829Outer membrane efflux protein. (539 aa)    
Predicted Functional Partners:
Lspi_2830
Membrane-fusion protein AcrA.
 
   0.949
Lspi_1733
Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.936
Lspi_2154
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.924
Lspi_2409
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.924
acrA
Acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.924
Lspi_1734
Integral membrane protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.923
Lspi_2155
Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.923
lmxF
RND multidrug efflux transporter MexF.
   
  0.923
Lspi_2410
Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.923
Lspi_2615
Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.923
Your Current Organism:
Legionella spiritensis
NCBI taxonomy Id: 452
Other names: ATCC 35249, CCUG 29715, CCUG 31118, CIP 103850, DSM 19324, JCM 7562, L. spiritensis, NCTC 11990, strain Mount Saint Helens 9
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.