Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQK27107.1 | KQK27108.1 | AR438_02570 | AR438_02575 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.556 |
KQK27107.1 | KQK27109.1 | AR438_02570 | AR438_02580 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
KQK27108.1 | KQK27107.1 | AR438_02575 | AR438_02570 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.556 |
KQK27108.1 | KQK27109.1 | AR438_02575 | AR438_02580 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.661 |
KQK27108.1 | mutS | AR438_02575 | AR438_02585 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.411 |
KQK27109.1 | KQK27107.1 | AR438_02580 | AR438_02570 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
KQK27109.1 | KQK27108.1 | AR438_02580 | AR438_02575 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.661 |
KQK27109.1 | mutS | AR438_02580 | AR438_02585 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.470 |
mutS | KQK27108.1 | AR438_02585 | AR438_02575 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.411 |
mutS | KQK27109.1 | AR438_02585 | AR438_02580 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.470 |