Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KQK25548.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)    
Predicted Functional Partners:
KQK25547.1
Collagen-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.947
KQK26192.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
KQK25545.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
KQK25546.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
KQK25553.1
Lycopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.416
KQK25543.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.401
KQK25544.1
Antirepressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.401
Your Current Organism:
Chryseobacterium aquaticum
NCBI taxonomy Id: 452084
Other names: C. aquaticum, CECT 7302, Chryseobacterium aquaticum Kim et al. 2008 emend. Hahnke et al. 2016, Chryseobacterium sp. 10-106, Chryseobacterium sp. 10-46, Chryseobacterium sp. VR86, KCTC 12483, strain 10-46
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