STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_07441DNA repair protein rhp26. (1157 aa)    
Predicted Functional Partners:
TCAP_03738
RPOL9 domain-containing protein.
    
 0.978
TCAP_01381
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.965
TCAP_06873
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.960
TCAP_04273
DNA excision repair protein ckn1.
    
 0.959
TCAP_02924
DNA-directed RNA polymerase II subunit rpb4.
    
 0.945
TCAP_02407
DNA-directed RNA polymerase II subunit RPB3.
    
 0.937
TCAP_01735
DNA damage-binding protein 1b.
    
 0.932
TCAP_07299
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.931
TCAP_06446
DNA-directed RNA polymerase II subunit RPB7.
    
 0.931
TCAP_05758
DNA-directed RNA polymerases II, IV and V subunit 12.
    
  0.929
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
Server load: low (16%) [HD]