STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_0718554S ribosomal protein L4, mitochondrial. (284 aa)    
Predicted Functional Partners:
TCAP_06213
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.996
TCAP_05122
54S ribosomal protein L23, mitochondrial.
   
 
 0.993
TCAP_04762
54S ribosomal protein subunit img1, mitochondrial.
   
 
 0.992
TCAP_03947
54S ribosomal protein L33, mitochondrial; Belongs to the universal ribosomal protein uL30 family.
   
   0.991
TCAP_02148
54S ribosomal protein L17, mitochondrial.
   
 
 0.991
TCAP_00515
54S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.991
TCAP_06726
54S ribosomal protein L27.
   
 
 0.990
TCAP_05978
37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.990
TCAP_06742
54S ribosomal protein yml6, mitochondrial.
   
 
 0.989
TCAP_04648
37S ribosomal protein RSM18, mitochondrial.
   
 
 0.988
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.