Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TCAP_00593 | TCAP_00741 | A0A2K3QPN3 | A0A2K3QP81 | Protein BFR2. | Sas10 domain-containing protein. | 0.993 |
TCAP_00593 | TCAP_01646 | A0A2K3QPN3 | A0A2K3QLM5 | Protein BFR2. | Nucleolar complex protein 14. | 0.997 |
TCAP_00593 | TCAP_01679 | A0A2K3QPN3 | A0A2K3QLG9 | Protein BFR2. | rRNA-processing protein fcf1. | 0.989 |
TCAP_00593 | TCAP_02408 | A0A2K3QPN3 | A0A2K3QJE4 | Protein BFR2. | Protein sof1. | 0.996 |
TCAP_00593 | TCAP_03601 | A0A2K3QPN3 | A0A2K3QG37 | Protein BFR2. | ATP-dependent RNA helicase DHR1. | 0.882 |
TCAP_00593 | TCAP_04286 | A0A2K3QPN3 | A0A2K3QE05 | Protein BFR2. | U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. | 0.991 |
TCAP_00593 | TCAP_04338 | A0A2K3QPN3 | A0A2K3QDY2 | Protein BFR2. | Ribosome biogenesis protein bms1. | 0.996 |
TCAP_00593 | TCAP_05663 | A0A2K3QPN3 | A0A2K3QA20 | Protein BFR2. | U3 small nucleolar RNA-associated protein 22. | 0.994 |
TCAP_00593 | TCAP_06714 | A0A2K3QPN3 | A0A2K3Q768 | Protein BFR2. | U3 small nucleolar RNA-associated protein 14. | 0.998 |
TCAP_00593 | TCAP_06924 | A0A2K3QPN3 | A0A2K3Q6M3 | Protein BFR2. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.991 |
TCAP_00741 | TCAP_00593 | A0A2K3QP81 | A0A2K3QPN3 | Sas10 domain-containing protein. | Protein BFR2. | 0.993 |
TCAP_00741 | TCAP_01646 | A0A2K3QP81 | A0A2K3QLM5 | Sas10 domain-containing protein. | Nucleolar complex protein 14. | 0.999 |
TCAP_00741 | TCAP_01679 | A0A2K3QP81 | A0A2K3QLG9 | Sas10 domain-containing protein. | rRNA-processing protein fcf1. | 0.998 |
TCAP_00741 | TCAP_02408 | A0A2K3QP81 | A0A2K3QJE4 | Sas10 domain-containing protein. | Protein sof1. | 0.998 |
TCAP_00741 | TCAP_03601 | A0A2K3QP81 | A0A2K3QG37 | Sas10 domain-containing protein. | ATP-dependent RNA helicase DHR1. | 0.994 |
TCAP_00741 | TCAP_04286 | A0A2K3QP81 | A0A2K3QE05 | Sas10 domain-containing protein. | U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. | 0.998 |
TCAP_00741 | TCAP_04338 | A0A2K3QP81 | A0A2K3QDY2 | Sas10 domain-containing protein. | Ribosome biogenesis protein bms1. | 0.998 |
TCAP_00741 | TCAP_05663 | A0A2K3QP81 | A0A2K3QA20 | Sas10 domain-containing protein. | U3 small nucleolar RNA-associated protein 22. | 0.998 |
TCAP_00741 | TCAP_06714 | A0A2K3QP81 | A0A2K3Q768 | Sas10 domain-containing protein. | U3 small nucleolar RNA-associated protein 14. | 0.999 |
TCAP_00741 | TCAP_06924 | A0A2K3QP81 | A0A2K3Q6M3 | Sas10 domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
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