STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_06630DNA mismatch repair protein pms1. (1037 aa)    
Predicted Functional Partners:
TCAP_04860
DNA mismatch repair protein msh-2; Belongs to the peptidase S8 family.
 
 0.994
TCAP_06965
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.989
TCAP_06309
DNA mismatch repair protein MLH1.
  
 
0.979
TCAP_06310
DNA mismatch repair protein MLH1.
  
 
0.978
TCAP_02486
Exodeoxyribonuclease 1.
   
 0.968
TCAP_05544
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.939
TCAP_00955
MutS protein.
 
 0.928
TCAP_00797
MutS protein.
 
 0.926
TCAP_01654
MutS protein-like protein 1.
 
 0.923
TCAP_04322
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.915
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.