STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_06263Uncharacterized protein. (482 aa)    
Predicted Functional Partners:
TCAP_03074
54S ribosomal protein L16, mitochondrial.
   
 0.765
TCAP_05097
Hsp70 nucleotide exchange factor FES1.
   
 0.627
TCAP_03880
60S ribosomal protein L10-A.
   
 0.627
TCAP_04028
54S ribosomal protein RML2, mitochondrial.
   
 
 0.523
TCAP_07185
54S ribosomal protein L4, mitochondrial.
    
   0.483
TCAP_06726
54S ribosomal protein L27.
    
   0.483
TCAP_06402
54S ribosomal protein L51, mitochondrial.
    
   0.483
TCAP_05978
37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
    
   0.483
TCAP_05897
37S ribosomal protein Mrp17.
    
   0.483
TCAP_05549
37S ribosomal protein S23, mitochondrial.
    
   0.483
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.