STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_06097APH domain-containing protein. (288 aa)    
Predicted Functional Partners:
TCAP_05780
Cross-pathway control protein 1.
    
 0.882
TCAP_03048
ANK_REP_REGION domain-containing protein.
    
 0.758
TCAP_01021
ANK_REP_REGION domain-containing protein.
    
 0.758
TCAP_02389
37S ribosomal protein S7, mitochondrial.
   
 
 0.735
TCAP_05978
37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.726
TCAP_00974
37S ribosomal protein S25, mitochondrial.
   
 
 0.726
TCAP_05222
60S ribosomal protein L9-B.
    
  0.723
TCAP_01045
Uncharacterized protein.
   
 
 0.704
TCAP_06213
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.697
TCAP_07404
37S ribosomal protein S19, mitochondrial; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.696
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.