Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TCAP_01224 | TCAP_02559 | A0A2K3QMV5 | A0A2K3QJ03 | Exosome complex exonuclease rrp6. | DNA ligase. | 0.822 |
TCAP_01224 | TCAP_04077 | A0A2K3QMV5 | A0A2K3QEL4 | Exosome complex exonuclease rrp6. | ATP-dependent DNA helicase II subunit 1. | 0.917 |
TCAP_01224 | TCAP_04740 | A0A2K3QMV5 | A0A2K3QCS5 | Exosome complex exonuclease rrp6. | DNA ligase 4. | 0.822 |
TCAP_01224 | TCAP_04850 | A0A2K3QMV5 | A0A2K3QCH1 | Exosome complex exonuclease rrp6. | Glycerophosphodiester phosphodiesterase. | 0.418 |
TCAP_01224 | TCAP_05365 | A0A2K3QMV5 | A0A2K3QAX9 | Exosome complex exonuclease rrp6. | DNA ligase. | 0.741 |
TCAP_01224 | TCAP_05713 | A0A2K3QMV5 | A0A2K3Q9X4 | Exosome complex exonuclease rrp6. | Uncharacterized protein. | 0.684 |
TCAP_01224 | TCAP_06634 | A0A2K3QMV5 | A0A2K3Q7G1 | Exosome complex exonuclease rrp6. | DNA ligase. | 0.741 |
TCAP_01224 | TCAP_06772 | A0A2K3QMV5 | A0A2K3Q725 | Exosome complex exonuclease rrp6. | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | 0.918 |
TCAP_02109 | TCAP_04850 | A0A2K3QKA3 | A0A2K3QCH1 | Ankyrin repeat protein nuc-2. | Glycerophosphodiester phosphodiesterase. | 0.968 |
TCAP_02109 | TCAP_05713 | A0A2K3QKA3 | A0A2K3Q9X4 | Ankyrin repeat protein nuc-2. | Uncharacterized protein. | 0.980 |
TCAP_02559 | TCAP_01224 | A0A2K3QJ03 | A0A2K3QMV5 | DNA ligase. | Exosome complex exonuclease rrp6. | 0.822 |
TCAP_02559 | TCAP_04077 | A0A2K3QJ03 | A0A2K3QEL4 | DNA ligase. | ATP-dependent DNA helicase II subunit 1. | 0.985 |
TCAP_02559 | TCAP_04885 | A0A2K3QJ03 | A0A2K3QCE2 | DNA ligase. | Phosphatidylinositol 3-kinase tor2; Belongs to the PI3/PI4-kinase family. | 0.822 |
TCAP_02559 | TCAP_05365 | A0A2K3QJ03 | A0A2K3QAX9 | DNA ligase. | DNA ligase. | 0.613 |
TCAP_02559 | TCAP_05713 | A0A2K3QJ03 | A0A2K3Q9X4 | DNA ligase. | Uncharacterized protein. | 0.719 |
TCAP_02559 | TCAP_06634 | A0A2K3QJ03 | A0A2K3Q7G1 | DNA ligase. | DNA ligase. | 0.620 |
TCAP_02559 | TCAP_06772 | A0A2K3QJ03 | A0A2K3Q725 | DNA ligase. | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | 0.981 |
TCAP_04077 | TCAP_01224 | A0A2K3QEL4 | A0A2K3QMV5 | ATP-dependent DNA helicase II subunit 1. | Exosome complex exonuclease rrp6. | 0.917 |
TCAP_04077 | TCAP_02559 | A0A2K3QEL4 | A0A2K3QJ03 | ATP-dependent DNA helicase II subunit 1. | DNA ligase. | 0.985 |
TCAP_04077 | TCAP_04740 | A0A2K3QEL4 | A0A2K3QCS5 | ATP-dependent DNA helicase II subunit 1. | DNA ligase 4. | 0.959 |
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