STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_05607DNA-(Apurinic or apyrimidinic site) lyase. (452 aa)    
Predicted Functional Partners:
TCAP_04500
DNA-(Apurinic or apyrimidinic site) lyase 2.
    
 0.991
TCAP_01023
DNA repair protein rad16.
   
 
 0.832
TCAP_05306
Mating-type switching protein swi10.
   
 
 0.752
TCAP_06230
DNA repair protein RAD14.
   
 
 0.738
TCAP_03817
DNA polymerase.
    
 
 0.728
TCAP_05608
Diacylglycerol O-acyltransferase 2A.
 
      0.673
TCAP_04318
N-glycosylase/DNA lyase.
    
 
 0.665
TCAP_06685
Single-stranded DNA-binding protein RIM1, mitochondrial.
   
 
 0.651
TCAP_02930
Crossover junction endonuclease MUS81.
   
 
 0.625
TCAP_05840
DNA repair and recombination protein rhm52.
    
 
 0.615
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.