STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_05671Chromatin structure-remodeling complex subunit snf21. (1616 aa)    
Predicted Functional Partners:
TCAP_03615
SWI/SNF chromatin-remodeling complex subunit snf5.
   
 0.997
TCAP_06420
SWI/SNF and RSC complexes subunit ssr3.
   
 0.995
TCAP_05520
Actin-like protein 4; Belongs to the actin family.
    
 0.986
TCAP_06625
SWI/SNF and RSC complexes subunit ssr2.
   
 0.965
TCAP_06626
SWI/SNF and RSC complexes subunit ssr2.
   
 0.965
TCAP_01786
Chromatin structure-remodeling complex subunit rsc1.
   
 0.965
TCAP_00074
Chromatin structure-remodeling complex subunit RSC1.
   
0.965
TCAP_02417
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.962
TCAP_01200
SWI/SNF chromatin-remodeling complex subunit sol1.
   
 
 0.947
TCAP_06175
Histone domain-containing protein.
    
 0.943
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.