STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_05504RHO GTPase-activating protein RGD1. (766 aa)    
Predicted Functional Partners:
TCAP_04029
Rho-type GTPase-activating protein 4.
    
0.996
TCAP_05361
Cell division control protein 42.
   
 0.855
TCAP_01718
Rho-type GTPase-activating protein 1.
   
0.852
TCAP_06293
Uncharacterized protein.
   
 0.846
TCAP_01591
GTP-binding protein rhoC.
   
 0.845
TCAP_05634
Rho-related protein rac1B.
   
 0.831
TCAP_02523
GTP-binding protein rho2.
   
 0.826
TCAP_05997
GTP-binding protein rhoA.
   
 0.787
TCAP_04591
Non-specific serine/threonine protein kinase.
    
 0.785
TCAP_01332
Non-specific serine/threonine protein kinase.
    
 0.785
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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