STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_05394Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (411 aa)    
Predicted Functional Partners:
TCAP_05833
HBS1-like protein.
   
 
 0.989
TCAP_02323
WD_REPEATS_REGION domain-containing protein.
    
 
 0.938
TCAP_05554
Uncharacterized protein.
  
 
 0.923
TCAP_00808
Ribosomal protein S6e.
    
 
 0.921
TCAP_00173
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.921
TCAP_02858
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.918
TCAP_00683
40S ribosomal protein S17.
    
 
 0.912
TCAP_01035
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.903
TCAP_05026
Putative ribosomal protein S28; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.900
TCAP_02965
60S ribosomal protein L33-A.
   
   0.900
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.