STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_05280Uncharacterized protein. (369 aa)    
Predicted Functional Partners:
TCAP_05279
Membrane protein.
 
      0.875
TCAP_05549
37S ribosomal protein S23, mitochondrial.
   
 
 0.862
TCAP_03074
54S ribosomal protein L16, mitochondrial.
   
  0.855
TCAP_05977
DASH complex, subunit Dad3.
    
 
 0.849
TCAP_06742
54S ribosomal protein yml6, mitochondrial.
   
 
 0.846
TCAP_01199
Uncharacterized protein.
   
   0.844
TCAP_06061
54S ribosomal protein L3, mitochondrial.
   
 
 0.840
TCAP_07416
Uncharacterized protein.
   
 
 0.830
TCAP_00515
54S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.824
TCAP_02148
54S ribosomal protein L17, mitochondrial.
   
   0.823
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.