STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_05258Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)    
Predicted Functional Partners:
TCAP_07470
60S ribosomal protein L5.
  
 0.996
TCAP_07438
60S ribosomal protein L7.
  
 0.996
TCAP_04160
60S ribosomal protein L25.
  
 0.996
TCAP_04094
60S ribosomal protein L35.
  
 0.996
TCAP_07387
60S ribosomal protein L31.
  
 0.995
TCAP_05621
Ribosomal protein L22/L17, eukaryotic/archaeal; Belongs to the universal ribosomal protein uL22 family.
  
 0.995
TCAP_05438
60S ribosomal protein L27-A.
   
 0.995
TCAP_05222
60S ribosomal protein L9-B.
  
 0.995
TCAP_03879
60S ribosomal protein L30.
   
 0.995
TCAP_03677
60S ribosomal protein L13.
   
 0.995
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.