STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_04790Rho guanyl nucleotide exchange factor. (1517 aa)    
Predicted Functional Partners:
TCAP_03658
Uncharacterized protein.
   
 0.894
TCAP_03048
ANK_REP_REGION domain-containing protein.
   
 0.681
TCAP_01021
ANK_REP_REGION domain-containing protein.
   
 0.681
TCAP_04030
Protein stu-1.
  
 
  0.599
TCAP_05969
DUF4203 domain-containing protein.
    
 0.584
TCAP_03989
Uncharacterized protein.
  
 
  0.584
TCAP_04810
Urea amidolyase.
    
 0.541
TCAP_01879
Ubiquitin-like protein SMT3.
    
  0.541
TCAP_05256
E3 ubiquitin ligase complex SCF subunit scon-3; Belongs to the SKP1 family.
    
  0.530
TCAP_02987
Uncharacterized protein.
    
  0.530
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.