STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_04336Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
TCAP_00478
Uncharacterized protein.
   
 
 0.794
TCAP_06801
Patatin-like phospholipase domain-containing protein.
    
 
 0.788
TCAP_04001
Translocation protein SEC62.
    
 
 0.788
TCAP_02951
Protein transport protein SEC61 subunit alpha.
    
 
 0.766
TCAP_00681
Uncharacterized protein.
    
 
 0.616
TCAP_00285
Uncharacterized protein.
    
 
 0.598
TCAP_06948
Non-specific serine/threonine protein kinase.
   
 0.563
TCAP_04957
Non-specific serine/threonine protein kinase.
   
 0.563
TCAP_01490
Serine/threonine-protein kinase.
   
 0.563
TCAP_06899
Uncharacterized protein.
    
 0.561
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.