STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_04280L-rhamnonate dehydratase. (452 aa)    
Predicted Functional Partners:
TCAP_05647
L-rhamnono-gamma-lactonase.
     
 0.936
TCAP_07146
UDP-N-acetylglucosamine pyrophosphorylase.
 
 
  
 0.871
TCAP_00155
4-hydroxy-2-oxoglutarate aldolase, mitochondrial.
   
 
 0.841
TCAP_04279
L-rhamnose-1-dehydrogenase.
 
    
 0.812
TCAP_02600
Malonyl CoA-acyl carrier protein transacylase.
  
 0.756
TCAP_03123
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.740
TCAP_00865
Uncharacterized protein YmaE.
   
 0.703
TCAP_01742
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.617
TCAP_05803
L-threo-3-deoxy-hexylosonate aldolase.
   
 
 0.605
TCAP_04560
4-hydroxy-2-oxoglutarate aldolase, mitochondrial; Belongs to the DapA family.
   
 
 0.605
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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