STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_04138Carboxypeptidase. (159 aa)    
Predicted Functional Partners:
TCAP_04168
C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 0.985
TCAP_05134
Squalene monooxygenase.
   
 
 0.963
TCAP_07602
Obtusifoliol 14-alpha demethylase; Belongs to the cytochrome P450 family.
   
 0.952
TCAP_07419
Eburicol 14-alpha-demethylase; Belongs to the cytochrome P450 family.
   
 0.952
TCAP_04589
Vigilin 1.
   
 0.937
TCAP_00907
Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.
   
 
 0.935
TCAP_01504
Delta(24(24(1)))-sterol reductase.
   
 0.931
TCAP_06466
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
 
     0.925
TCAP_06071
Cytochrome P450 61; Belongs to the cytochrome P450 family.
   
 0.918
TCAP_01539
Terpene synthase.
  
 0.916
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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