STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_04066Vacuolar membrane protein. (454 aa)    
Predicted Functional Partners:
TCAP_02338
Ras-related protein Rab7.
 
      0.846
TCAP_01004
Sphingoid long-chain base transporter RSB1.
 
      0.577
TCAP_04067
Uncharacterized protein.
 
      0.536
TCAP_06996
Xaa-Pro aminopeptidase.
     
 0.519
TCAP_06174
Xaa-Pro aminopeptidase P; Belongs to the peptidase M24B family.
     
 0.519
TCAP_03856
Peptidase M24, structural domain protein.
     
 0.519
TCAP_03213
Intermediate cleaving peptidase 55.
     
 0.519
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.