STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_03692SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)    
Predicted Functional Partners:
TCAP_01879
Ubiquitin-like protein SMT3.
   
 0.999
TCAP_03936
Ubiquitin-activating enzyme E1-like protein.
   
 0.996
TCAP_01415
RanBD1 domain-containing protein.
   
 0.995
TCAP_06913
DNA damage tolerance protein RHC31.
  
 0.985
TCAP_00314
E3 SUMO-protein ligase pli1.
    
 0.973
TCAP_07468
MIZ zinc finger protein.
    
 0.963
TCAP_07076
Ran GTPase-activating protein 1.
   
 0.960
TCAP_04430
Uncharacterized protein.
   
 0.960
TCAP_00933
E3 SUMO-protein ligase nse2.
   
 0.953
TCAP_01922
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.951
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.