STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_03448Biotin synthase, mitochondrial. (421 aa)    
Predicted Functional Partners:
TCAP_02381
Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.995
TCAP_06109
Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial.
 
 
 0.975
TCAP_05487
Ornithine aminotransferase.
 
 
 
 0.955
TCAP_03674
Biotin-protein ligase.
  
 
 0.948
TCAP_06108
8-amino-7-oxononanoate synthase.
  
 0.904
TCAP_00142
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.891
TCAP_06443
Carbamoyl-phosphate synthase arginine-specific large chain.
  
 
 0.781
TCAP_04786
Protein pyrABCN.
  
 
 0.774
TCAP_02202
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
   
 
 0.771
TCAP_01324
Protein CHROMATIN REMODELING 20.
  
  
 0.769
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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