STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_03333Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (524 aa)    
Predicted Functional Partners:
TCAP_04833
Peptidyl-prolyl cis-trans isomerase cyp15.
  
0.901
TCAP_02163
Pre-mRNA-splicing factor syf2.
    
 0.876
TCAP_01393
Pre-mRNA-splicing factor cwc22.
   
 0.862
TCAP_05163
Pre-mRNA-processing factor 17.
   
 0.845
TCAP_01290
Nucleoporin.
   
 0.815
TCAP_03588
Pre-mRNA-processing protein 45.
   
 0.809
TCAP_07248
Splicing factor 3A subunit 1.
   
 0.799
TCAP_03258
ATP-dependent RNA helicase SUB2.
   
 0.798
TCAP_05398
Pre-mRNA-processing factor 19.
    
 0.797
TCAP_00977
ATP-dependent RNA helicase mtr4.
   
  0.797
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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