STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_03152Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (527 aa)    
Predicted Functional Partners:
TCAP_02834
SRP9-21 domain-containing protein.
   
 0.999
TCAP_02699
Signal recognition particle subunit SRP68.
    
 0.999
TCAP_02053
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
   
 0.999
TCAP_04982
Signal recognition particle receptor subunit alpha.
 
0.998
TCAP_02824
Uncharacterized protein.
    
 0.998
TCAP_04160
60S ribosomal protein L25.
   
 0.990
TCAP_04094
60S ribosomal protein L35.
   
 
 0.984
TCAP_03664
60S ribosomal protein L26-1.
   
 0.983
TCAP_07470
60S ribosomal protein L5.
   
 
 0.980
TCAP_02790
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.980
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.