STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_02962Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (576 aa)    
Predicted Functional Partners:
TCAP_02202
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.994
TCAP_04076
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
 
 0.992
TCAP_05019
Oxygen-dependent coproporphyrinogen-III oxidase.
  
 
 0.948
TCAP_00318
Uroporphyrinogen-III synthase.
  
 
 0.795
TCAP_01815
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
  0.786
TCAP_01215
Bifunctional protein gal10.
    
  0.715
TCAP_00700
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
  0.715
TCAP_00256
Lactoylglutathione lyase.
   
 
  0.704
TCAP_05682
Epimerase domain-containing protein.
    
  0.693
TCAP_02070
UDP-glucose 4-epimerase 5.
    
  0.693
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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